Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891490.1_cds_XP_016446275.1_41148
CDS Infomation

[gene=LOC107771428] [db_xref=GeneID:107771428] [protein=coatomer subunit beta'-2-like] [protein_id=XP_016446275.1] [location=join(12968..12970,13196..13216,13306..13367,13640..13694,14809..14845,14959..15284,15399..15530,15617..15765,16369..16437,16719..16869,16963..17028,17571..17759,18135..18275,18369..18443,18548..18724,18822..18913,19002..19118,19701..19815,19926..19997,20362..20558,20643..20736,21320..21426,21658..21784,22000..22156,22672..22691)] [gbkey=CDS]
Sequence

ATGCCTCTGAGGTTGGAGATTAAGAGGAAACTTGCTCAAAGATCAGAAAGGGTAAAGTGC
GTGGATCTACATCCTACAGAGCCATGGATATTGGCAAGTTTGTATTCGGGGACTGTTTGC
ATCTGGAACTACCAGACCCAGACAATGGCTAAATCTTTCGAAGTTACTGAATTACCAGTT
AGGTCAGCAAAGTTCATAGCACGCAAGCAGTGGGTTGTTGCCGGTGCTGATGATATGTTT
ATTCGTGTATACAATTACAATACCATGGACAAGGTCAAAGTATTTGAGGCGCACACTGAT
TATATTAGGTGTGTGGCTGTTCATCCTACTCTACCATATGTGCTGTCATCTTCTGATGAC
ATGCTTATAAAGCTTTGGGACTGGGATAAGGGATGGGTATGCACTCAAATTTTTGAGGGT
CATTCCCATTATGTGATGCAAGTCACTTTTAATCCGAAAGACACCAATACATTTGCCAGT
GCATCTCTTGATCGAACTATAAAGATTTGGAACCTCGGCTCCCCTGACCCAAACTTCACG
TTGGATGCGCATCTAAAAGGGGTTAATTGTGTAGACTATTTTACTGGTGGTGATAAACCT
TATCTGATAACGGGTTCTGATGACCACACTGCTAAGGTGTGGGACTATCAGACAAGAAGT
TGTGTCCAGACTCTTGAAGGCCATACACACAACGTGTCCGCCGTATGTTTTCATCCTGAG
CTTCCTATTATAATTACGGGATCTGAAGATGGTACAGTTCGTATATGGCATGCAACCACT
TATAGACTTGAGAACACTTTGAATTACGGTCTTGAAAGAGTTTGGGCAATTGGTTACATG
AGAAGTTCAAGAAGGGTTGTAATCGGTTATGATGAGGGAACTATCATGGTAAAAATTGGT
CGAGAAGAACCAGTTGCCAGCATGGATAACAGTGGAAAAATTATATGGGCTAAGCACAAT
GAAGTTCAAACAGTCAACATCAAGAGTGTGGGGGCGGATTATGAGGTTACTGATGGAGAA
AGGTTGCCTTTGGCTGTCAAGGAATTGGGAACTTGTGACCTCTATCCACAAAGCTTGAAG
CATAACCCAAATGGAAGGTTCGTTGTTGTTTGTGGTGATGGAGAGTATATCATATATACT
GCTCTAGCATGGAGAAATAGGTCATTTGGTTCAGCTCTGGAATTTGTTTGGTCCTCTGAT
GGAGAATATGCTGTGAGGGAAAGTACGTCAAGGATTAAGATCTTCAGCAAAAATTTCCAG
GAAAAGAAGAGCATCCGTCCTACTTTCTCAGCTGAGCGCATCTATGGAGGTACTCTATTG
GCGATGTGCTCAAATGATTTTATTTGTTTCTATGATTGGGCTGACTGTAGGCTGATACGG
CGAATTGATGTTAATGTGAAGAACCTCTACTGGGCTGACAGTGGTGATATGGTGGCAATT
GCAAGTGATACATCCTTCTACATACTTAAGTATAATCGTGATGTGGTTTCTGCCCATTTA
GATAGTGGAAGATCAGTAGATGAGCAAGGCGTTGAAGAAGCTTTTGAACTTCTTTATGAG
ATAAATGAACGGGTCAGGACTGGAATTTGGGTTGGCGATTGCTTCATTTACAATAATTCT
TCATGGAGACTTAACTACTGTGTTGGGGGTGAGGTGACCACAATGTTTCATTTAGACCGG
CCTATGTACCTGCTTGGATATCTAGCTAACCAGAGTAGGGTTTTCCTGATTGACAAAGAG
TTCAATGTCATTGGATATACTTTGCTGCTCAGCTTGATCGAGTACAAGACACTTGTGATG
CGTGATGACTGGGACAGAGCAAATGAGGTGCTGCCATCGATTCCTAAGGAGCACCATAAT
AGTGTTGCTCGTTTCTTGGAGTCGCGGGGTATGATAGAGGAAGCATTAGAAGTTGCAACA
GAGCCTGACTACAGATTTGAACTAGCCATACAGCTGGGAAAATTAGATATTGCAAAGGAT
ATTGCAGTGGTAGCTCAGAGTGAGTCCAAGTGGAAGCAGTTGGGTGAACTAGCCATGTCT
GCTGGAATGCTGGAGATGGCAGAGGAATGTCTGAAGTATGCGAATGACTTGAGTGGTCTG
TTGCTACTCTATTCTTCACTTGGAGATGCTGAAGGAATAACTGAACTAGCAACTTCTGCC
AAAGAGCAGGGGAAAAACAATGTCACATTCCTCTGCATGTTCCTTTTGGGTAAAGTGGAG
GAATGCATTCAGCTATTGGTTGATAGCAACCGGATACCTGAGGCTGCTTTTATGGCTAGA
TCTTATCTGCCAAGTAAGGTTTCTGAAATAGTTGCAATTTGGAGGAAGGACCTCAGTAAG
GTTAACCAGAAAGCAGCAGAAGCTTTGGCTGATCCTGAAGAATATCCTAATCTGTTTGAG
AACTGGCAAGTTGCATGTGCTGTTGAAGCTAGAGTTGCAGAGGAAAGGGGTGGCTACCCA
CCAGCAACTGATTACGTAAATCATGTTGATAGATCAACTAACAACCTTGTAGAGGCTTTC
AACAACATGAGAATGGATGAAGAACCACTTGAAAATGGAGATATGGACCACGAGGTTGCA
GAACAGAGTGGTGATGAGGTGCAAGAATTGGAGGCAGATGATGCACAAAATGAGGAACAA
GAAGAGGGCCAAGAAGAGGCTGTGGTCGTGGATGGTGTGTCTACTGACGGTGCAGTACTC
ATTAATAGAAATGAGGCAGACGAAGAGTGGGTGCTTACACCACATCACTAA

Peptide Sequence

PEP ID

XP_016446275.1
PEP Infomation

PREDICTED: coatomer subunit beta'-2-like [Nicotiana tabacum]
Sequence

MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTRSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMRSSRRVVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEVQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWADCRLIRRIDVNVKNLYWADSGDMVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEEAFELLYEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLIEYKTLVM
RDDWDRANEVLPSIPKEHHNSVARFLESRGMIEEALEVATEPDYRFELAIQLGKLDIAKD
IAVVAQSESKWKQLGELAMSAGMLEMAEECLKYANDLSGLLLLYSSLGDAEGITELATSA
KEQGKNNVTFLCMFLLGKVEECIQLLVDSNRIPEAAFMARSYLPSKVSEIVAIWRKDLSK
VNQKAAEALADPEEYPNLFENWQVACAVEARVAEERGGYPPATDYVNHVDRSTNNLVEAF
NNMRMDEEPLENGDMDHEVAEQSGDEVQELEADDAQNEEQEEGQEEAVVVDGVSTDGAVL
INRNEADEEWVLTPHH

Transcript Sequence

Gene sequence data has not been registered.